[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing all 29 items for (author: galan & j)

EMDB-41046:
Subtomogram average structure of the injectisome
Method: subtomogram averaging / : Park D

EMDB-41047:
Intermembrane Tether between SCV and Mitochondria
Method: subtomogram averaging / : Park D, Liu J, Galan J

EMDB-24734:
Cryo-EM map of the end of T3SS needle
Method: single particle / : Guo EZ, Galan JE

EMDB-24735:
Cryo-EM structure of the needle filament-tip complex of the Salmonella type III secretion injectisome
Method: single particle / : Guo EZ, Galan JE

EMDB-24736:
Cryo-EM structure of the T3SS needle without tip
Method: helical / : Guo EZ, Galan JE

EMDB-24737:
Cryo-EM map of T3SS needle
Method: helical / : Guo EZ, Galan JE

PDB-7rye:
Cryo-EM structure of the needle filament-tip complex of the Salmonella type III secretion injectisome
Method: single particle / : Guo EZ, Galan JE

EMDB-20830:
Cryo-EM reconstruction of the inner membrane rings containing the core components of the export apparatus and associated membranes of the needle complex from Salmonella typhimurium type III secretion system.
Method: single particle / : Butan C, Galan J

EMDB-20831:
Cryo-EM reconstruction shows that the needle complex's inner rings from Salmonella assemble with 23-fold symmetry in the absence of the export apparatus.
Method: single particle / : Butan C, Galan J

EMDB-20832:
Cryo-EM structure of the PrgHK periplasmic ring from the Salmonella SPI-1 type III secretion needle complex solved at 3.3 angstrom resolution
Method: single particle / : Butan C, Galan J

EMDB-20833:
Cryo-EM reconstruction of the PrgHK periplasmic ring from Salmonella's needle complex assembled in the absence of the export apparatus
Method: single particle / : Butan C, Galan J

PDB-6uot:
Cryo-EM structure of the PrgHK periplasmic ring from the Salmonella SPI-1 type III secretion needle complex solved at 3.3 angstrom resolution
Method: single particle / : Butan C, Galan J

PDB-6uov:
Cryo-EM reconstruction of the PrgHK periplasmic ring from Salmonella's needle complex assembled in the absence of the export apparatus
Method: single particle / : Butan C, Galan J

EMDB-20838:
In situ structure of the export apparatus in Salmonella T3SS machine
Method: subtomogram averaging / : Liu J

EMDB-20043:
Helical reconstruction of Type III Secretion System Needle filament mutant-PrgI S49A
Method: helical / : Guo EZ, Galan JE

EMDB-20044:
High-resolution filamentous structures of in vitro polymerized PrgI needle
Method: helical / : Guo EZ, Galan JE

EMDB-20045:
In vitro polymerized PrgI V67A filaments
Method: helical / : Guo EZ, Galan JE

EMDB-20046:
Structure of Salmonella type III secretion system needle filament
Method: helical / : Guo EZ, Galan JE

PDB-6ofe:
Helical reconstruction of Type III Secretion System Needle filament mutant-PrgI S49A
Method: helical / : Guo EZ, Galan JE

PDB-6off:
High-resolution filamentous structures of in vitro polymerized PrgI needle
Method: helical / : Guo EZ, Galan JE

PDB-6ofg:
In vitro polymerized PrgI V67A filaments
Method: helical / : Guo EZ, Galan JE

PDB-6ofh:
Structure of Salmonella type III secretion system needle filament
Method: helical / : Guo EZ, Galan JE

EMDB-8544:
Salmonella Type III secretion injectisome
Method: subtomogram averaging / : Hu B, Liu J

EMDB-8545:
SpaO mutant structure of Salmonella Type III secretion injectisome
Method: subtomogram averaging / : Hu B, Liu J

EMDB-5389:
An RNA Degradation Machine Sculpted by Ro Autoantigen and Noncoding RNA
Method: single particle / : Chen X, Taylor DW, Wang HW, Wolin SL

EMDB-1214:
Assembly of the inner rod determines needle length in the type III secretion injectisome.
Method: single particle / : Marlovits TC, Kubori T, Lara-Tejero M, Thomas D, Unger VM, Galan JE

EMDB-1215:
Assembly of the inner rod determines needle length in the type III secretion injectisome.
Method: single particle / : Marlovits TC, Kubori T, Lara-Tejero M, Thomas D, Unger VM, Galan JE

EMDB-1224:
Structural insights into the assembly of the type III secretion needle complex.
Method: single particle / : Marlovits TC, Kubori T, Thomas MDR, Galan JE, Unger VM

EMDB-1100:
Structural insights into the assembly of the type III secretion needle complex.
Method: single particle / : Marlovits TC, Kubori T, Sukhan A, Thomas DR, Galan JE, Unger VM

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more